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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810953.1_cds_XP_016496469.1_10689
CDS Infomation

[gene=LOC107815410] [db_xref=GeneID:107815410] [protein=protein LOW PSII ACCUMULATION 1, chloroplastic-like] [protein_id=XP_016496469.1] [location=complement(join(21721..21859,22106..22156,22298..22870,24688..24884))] [gbkey=CDS]
Sequence

ATGGCTACGGCGGCGCAATTCTCCTATATTACCGTCAGTTCACCCAACTTCCATCCTAGC
GCTAATAAACGGTTCGCATTTTCCCGCCAATTGAAAGATGGTGCGAAATTCTATACTGAT
GTCACCAGCTCCAGACGTAAACCCAAATTGCTCTCTATAGTTTGTAGTAATTCGAGTCCT
TCTTCTGATAGTATAAGTTCCACAGCCAAGATAAGAAGTGAAGTTCTTACTCCCTTTCGG
TCTGTTCGGATGTTCTTCTATGTTGCTTTCATTGCAAGTGGTGGTCTTGGAGGACTCATT
GCCTCTACACGACTAATTGCGGCATTGGCCAATTCATCAAGAGCAGCTGAAGTTCCTGAG
ATCCTAAAAGGCCTTGGCATAGACCTCGTCGCAGTCTCTGTATTTGCTTTTCTGTATTAT
AGGGAGAATAGAGCAAAGAATGCACAGGTGGCAAGATTAGTAAGAGAGGAAAATCTTGCA
AATCTTAAGCTTCGTGTGGATGAGAAGAAAATCGTTCCCCTGAGTGCTTTCAGAGGAATT
GCTCGTTTGGTCATCCTTGCTGGCCCTTCGGCTTTCATTTCAGAATGTTTCAGACTCAGC
GAACCATTTACCGATGGCCTTCTTGAAAGAGGGGTGCTTGTGGTCCCTTTTGCAACTGAT
GGAATTTCTCCTAGTTTTGAGTTTGAAGAGAATGAAGAACTTGAGGAGAAGGTATCCAGA
AGAAAAAGGCTATGGCAGCTTGCTCCTCTTTATGCCACTGAGTGGACCAAGTGGATAGAT
GAACAAAAGAAACTAGCCAACGTCTCTCCTGAATCTCCAGTGTATTTATCTTTACGCCTG
GATGGCCGTGTGCGTGGCAGCGGTGTTGGTTATCCTCCTTGGAATGCTTTTGTAGTGCAA
TTGCCACCAGTAAAGGGAATTTGGTCTGGTCTTCTTGATGGCATGGATGGAAGAGTTTAA

Peptide Sequence

PEP ID

XP_016496469.1
PEP Infomation

PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MATAAQFSYITVSSPNFHPSANKRFAFSRQLKDGAKFYTDVTSSRRKPKLLSIVCSNSSP
SSDSISSTAKIRSEVLTPFRSVRMFFYVAFIASGGLGGLIASTRLIAALANSSRAAEVPE
ILKGLGIDLVAVSVFAFLYYRENRAKNAQVARLVREENLANLKLRVDEKKIVPLSAFRGI
ARLVILAGPSAFISECFRLSEPFTDGLLERGVLVVPFATDGISPSFEFEENEELEEKVSR
RKRLWQLAPLYATEWTKWIDEQKKLANVSPESPVYLSLRLDGRVRGSGVGYPPWNAFVVQ
LPPVKGIWSGLLDGMDGRV

Transcript Sequence

Gene sequence data has not been registered.